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T

TABLE - Static variable in class ij.io.Opener
 
TABLE - Static variable in class ij.plugin.NewPlugin
 
TABLE_FULL - Static variable in class ij.measure.ResultsTable
 
tabSize - Variable in class ij.plugin.frame.jedit.LNTextAreaPainter
 
tabSize - Variable in class ij.plugin.frame.jedit.TextAreaPainter
 
TAN - Static variable in interface ij.macro.MacroConstants
 
tempLabel - Variable in class ij2x.plugin.ThreeColor
 
temporarilyHide() - Method in class ij.gui.Roi
Deprecated
TEXT - Static variable in class ij.gui.Toolbar
 
TEXT - Static variable in class ij.io.Opener
 
TEXT - Static variable in class ij.io.RoiDecoder
 
TEXT_FILE - Static variable in class ij.plugin.NewPlugin
 
textArea - Variable in class ij.plugin.frame.jedit.LNTextAreaPainter
 
textArea - Variable in class ij.plugin.frame.jedit.TextAreaPainter
 
textArea1 - Variable in class ij.gui.GenericDialog
 
textArea2 - Variable in class ij.gui.GenericDialog
 
TextAreaDefaults - Class in ij.plugin.frame.jedit
Encapsulates default settings for a text area.
TextAreaDefaults() - Constructor for class ij.plugin.frame.jedit.TextAreaDefaults
 
TextAreaPainter - Class in ij.plugin.frame.jedit
The text area repaint manager.
TextAreaPainter(JEditTextArea, TextAreaDefaults) - Constructor for class ij.plugin.frame.jedit.TextAreaPainter
Creates a new repaint manager.
TextAreaPainter.Highlight - Interface in ij.plugin.frame.jedit
Highlight interface.
TextEncoder - Class in ij.io
Saves an image described by an ImageProcessor object as a tab-delimited text file.
TextEncoder(ImageProcessor, Calibration, int) - Constructor for class ij.io.TextEncoder
Constructs a TextEncoder from an ImageProcessor and optional Calibration.
TextFileReader - Class in ij.plugin
This plugin displays the contents of a text file in a window.
TextFileReader() - Constructor for class ij.plugin.TextFileReader
 
TeXTokenMarker - Class in ij.plugin.frame.jedit.tokenmarker
TeX token marker.
TeXTokenMarker() - Constructor for class ij.plugin.frame.jedit.tokenmarker.TeXTokenMarker
 
TextPanel - Class in ij.text
This is an unlimited size text panel with tab-delimited, labeled and resizable columns.
TextPanel() - Constructor for class ij.text.TextPanel
Constructs a new TextPanel.
TextPanel(String) - Constructor for class ij.text.TextPanel
Constructs a new TextPanel.
TextReader - Class in ij.plugin
This plugin opens a tab or comma delimeted text file as an image.
TextReader() - Constructor for class ij.plugin.TextReader
 
TextRoi - Class in ij.gui
This class is a rectangular ROI containing text.
TextRoi(int, int, String) - Constructor for class ij.gui.TextRoi
Creates a new TextRoi.
TextRoi(int, int, String, Font) - Constructor for class ij.gui.TextRoi
Creates a new TextRoi with the specified location and Font.
TextRoi(int, int, String, Font, Color) - Constructor for class ij.gui.TextRoi
Deprecated.  
TextRoi(int, int, ImagePlus) - Constructor for class ij.gui.TextRoi
 
TextUtilities - Class in ij.plugin.frame.jedit
Class with several utility functions used by the text area component.
TextUtilities() - Constructor for class ij.plugin.frame.jedit.TextUtilities
 
textValueChanged(DocumentEvent) - Method in class ij.gui.ColorChooser
 
textValueChanged(AWTEvent, DocumentEvent) - Method in class ij.gui.GenericDialog
 
textValueChanged(DocumentEvent) - Method in class ij.macro.FunctionFinder
 
textValueChanged(DocumentEvent) - Method in class ij.plugin.Distribution
 
textValueChanged(DocumentEvent) - Method in class ij.plugin.Duplicator
 
textValueChanged(DocumentEvent) - Method in class ij.plugin.filter.ImageProperties
 
textValueChanged(DocumentEvent) - Method in class ij.plugin.frame.LineWidthAdjuster
 
textValueChanged(DocumentEvent) - Method in class ij.plugin.Histogram
 
textValueChanged(DocumentEvent) - Method in class ij.plugin.Resizer
 
textValueChanged(DocumentEvent) - Method in class ij.plugin.Scaler
 
textValueChanged(DocumentEvent) - Method in class ij.plugin.Slicer
 
TextWindow - Class in ij.text
Uses a TextPanel to displays text in a window.
TextWindow(String, String, int, int) - Constructor for class ij.text.TextWindow
Opens a new single-column text window.
TextWindow(String, String, String, int, int) - Constructor for class ij.text.TextWindow
Opens a new multi-column text window.
TextWindow(String, int, int) - Constructor for class ij.text.TextWindow
Opens a new text window containing the contents of a text file.
TextWriter - Class in ij.plugin
This plugin implements the File/Save As/Text command.
TextWriter() - Constructor for class ij.plugin.TextWriter
 
theLabel - Variable in class ij.gui.GenericDialog
 
theta - Variable in class ij.process.EllipseFitter
Angle in radians
thread - Variable in class ij.gui.StackWindow
 
ThreadLister - Class in ij.plugin
Displays thread information in a text window.
ThreadLister() - Constructor for class ij.plugin.ThreadLister
 
THREADS - Static variable in class ij.Prefs
 
ThreeColor - Class in ij2x.plugin
Title: ThreeColor Description: Copyright: Copyright (c) Company: rawak.de
ThreeColor() - Constructor for class ij2x.plugin.ThreeColor
 
ThreeColor.ColorIconArea - Class in ij2x.plugin
 
ThreeColor.ColorIconArea() - Constructor for class ij2x.plugin.ThreeColor.ColorIconArea
 
threshold(int) - Method in class ij.process.ByteProcessor
Sets pixels less than or equal to level to 0 and all other pixels to 255.
threshold(int) - Method in class ij.process.ColorProcessor
Not implemented.
threshold(int) - Method in class ij.process.FloatProcessor
Not implemented.
threshold(int) - Method in class ij.process.ImageProcessor
Sets pixels less than or equal to level to 0 and all other pixels to 255.
threshold(int) - Method in class ij.process.ShortProcessor
 
ThresholdAdjuster - Class in ij.plugin.frame
Adjusts the lower and upper threshold levels of the active image.
ThresholdAdjuster() - Constructor for class ij.plugin.frame.ThresholdAdjuster
 
Thresholder - Class in ij.plugin
This plugin implements the Process/Binary/Make Binary and Convert to Mask commands.
Thresholder() - Constructor for class ij.plugin.Thresholder
 
ThresholdToSelection - Class in ij.plugin.filter
 
ThresholdToSelection() - Constructor for class ij.plugin.filter.ThresholdToSelection
 
throwableToString(Throwable) - Static method in class ij.plugin.frame.jedit.MiscUtilities
Returns a string containing the stack trace of the given throwable.
TIFF - Static variable in class ij.io.FileInfo
 
TIFF - Static variable in class ij.io.Opener
 
TIFF_AND_DICOM - Static variable in class ij.io.Opener
 
TiffDecoder - Class in ij.io
Decodes single and multi-image TIFF files.
TiffDecoder(String, String) - Constructor for class ij.io.TiffDecoder
 
TiffDecoder(InputStream, String) - Constructor for class ij.io.TiffDecoder
 
TiffEncoder - Class in ij.io
Saves an image described by a FileInfo object as an uncompressed, big-endian TIFF file.
TiffEncoder(FileInfo) - Constructor for class ij.io.TiffEncoder
 
TILE_WIDTH - Static variable in class ij.io.TiffDecoder
 
tileMirror(ImageProcessor, int, int, int, int) - Method in class ij.plugin.filter.FFTFilter
Puts ImageProcessor (ROI) into a new ImageProcessor of size width x height y at position (x,y).
time(ImagePlus, long) - Static method in class ij.IJ
Experimental
Timer - Class in ij.plugin
ImageJ plugin for measuring the speed of various Java operations.
Timer() - Constructor for class ij.plugin.Timer
 
tipSuffix - Static variable in class ij.plugin.frame.Editor
Suffix applied to the key used in resource file lookups for tooltip text.
tipSuffix - Static variable in class ij2x.plugin.frame.Editor
Suffix applied to the key used in resource file lookups for tooltip text.
TO_BINARY - Static variable in interface ij.macro.MacroConstants
 
TO_HEX - Static variable in interface ij.macro.MacroConstants
 
TO_LOWER_CASE - Static variable in interface ij.macro.MacroConstants
 
TO_STRING - Static variable in interface ij.macro.MacroConstants
 
TO_UPPER_CASE - Static variable in interface ij.macro.MacroConstants
 
toArray() - Method in class ij.gui.Overlay
Returns on array containing the Rois in this Overlay.
toDouble(float[]) - Static method in class ij.util.Tools
Converts the float array 'a' to a double array.
toEDM(ImageProcessor) - Method in class ij.plugin.filter.EDM
Converts a binary image into a 8-bit grayscale Euclidean Distance Map (EDM).
toFloat(int, FloatProcessor) - Method in class ij.process.ByteProcessor
Returns a FloatProcessor with the same image, no scaling or calibration (pixel values 0 to 255).
toFloat(int, FloatProcessor) - Method in class ij.process.ColorProcessor
Returns a FloatProcessor with one color channel of the image.
toFloat(int, FloatProcessor) - Method in class ij.process.FloatProcessor
Returns this FloatProcessor.
toFloat(int, FloatProcessor) - Method in class ij.process.ImageProcessor
Returns a FloatProcessor with the image or one color channel thereof.
toFloat(int, FloatProcessor) - Method in class ij.process.ShortProcessor
Returns a FloatProcessor with the same image, no scaling or calibration (pixel values 0 to 65535).
toFloat(double[]) - Static method in class ij.util.Tools
Converts the double array 'a' to a float array.
toFloatArrays() - Method in class ij.process.ByteProcessor
 
toFloatProcessors() - Method in class ij.process.ByteProcessor
 
toFront(JFrame) - Static method in class ij.WindowManager
 
TOGGLE_RECT - Static variable in class ij.plugin.frame.jedit.InputHandler
 
TOK_MASK - Static variable in interface ij.macro.MacroConstants
 
TOK_SHIFT - Static variable in interface ij.macro.MacroConstants
 
token - Variable in class ij.plugin.frame.jedit.syntax.ParserRule
 
Token - Class in ij.plugin.frame.jedit.syntax
A linked list of syntax tokens.
Token(byte, int, int, ParserRuleSet) - Constructor for class ij.plugin.frame.jedit.syntax.Token
Creates a new token.
Token - Class in ij.plugin.frame.jedit.tokenmarker
A linked list of tokens.
Token(int, byte) - Constructor for class ij.plugin.frame.jedit.tokenmarker.Token
Creates a new token.
token - Variable in class ij.plugin.frame.jedit.tokenmarker.TokenMarker.LineInfo
The id of the last token of the line.
TOKEN_TYPES - Static variable in class ij.plugin.frame.jedit.syntax.Token
 
TokenHandler - Interface in ij.plugin.frame.jedit.syntax
Token markers send tokens to implementations of this interface.
tokenize(String) - Method in class ij.macro.Tokenizer
Uses a StreamTokenizer to convert an ImageJ macro file into a token stream.
tokenize(String) - Method in class ij.plugin.frame.Editor
Take the given string and chop it up into a series of strings on whitespace boundaries.
tokenize(String) - Method in class ij2x.plugin.frame.Editor
Take the given string and chop it up into a series of strings on whitespace boundaries.
tokenizeLines() - Method in class ij.plugin.frame.jedit.SyntaxDocument
Reparses the document, by passing all lines to the token marker.
tokenizeLines(int, int) - Method in class ij.plugin.frame.jedit.SyntaxDocument
Reparses the document, by passing the specified lines to the token marker.
Tokenizer - Class in ij.macro
This class converts an imageJ macro file file into a token stream.
Tokenizer() - Constructor for class ij.macro.Tokenizer
 
TokenMarker - Class in ij.plugin.frame.jedit.syntax
A token marker splits lines of text into tokens.
TokenMarker() - Constructor for class ij.plugin.frame.jedit.syntax.TokenMarker
 
tokenMarker - Variable in class ij.plugin.frame.jedit.SyntaxDocument
 
TokenMarker - Class in ij.plugin.frame.jedit.tokenmarker
A token marker that splits lines of text into tokens.
TokenMarker() - Constructor for class ij.plugin.frame.jedit.tokenmarker.TokenMarker
Creates a new TokenMarker.
TokenMarker.LineContext - Class in ij.plugin.frame.jedit.syntax
Stores persistent per-line syntax parser state.
TokenMarker.LineContext(ParserRuleSet, TokenMarker.LineContext) - Constructor for class ij.plugin.frame.jedit.syntax.TokenMarker.LineContext
 
TokenMarker.LineContext() - Constructor for class ij.plugin.frame.jedit.syntax.TokenMarker.LineContext
 
TokenMarker.LineInfo - Class in ij.plugin.frame.jedit.tokenmarker
Inner class for storing information about tokenized lines.
TokenMarker.LineInfo() - Constructor for class ij.plugin.frame.jedit.tokenmarker.TokenMarker.LineInfo
Creates a new LineInfo object with token = Token.NULL and obj = null.
TokenMarker.LineInfo(byte, Object) - Constructor for class ij.plugin.frame.jedit.tokenmarker.TokenMarker.LineInfo
Creates a new LineInfo object with the specified parameters.
tokenToString(byte) - Static method in class ij.plugin.frame.jedit.syntax.Token
Converts a token type constant to a token type string.
TOOL_CHANGED - Static variable in interface ij.IJEventListener
 
TOOL_ID - Static variable in interface ij.macro.MacroConstants
 
Toolbar - Class in ij.gui
The ImageJ toolbar.
Toolbar() - Constructor for class ij.gui.Toolbar
 
toolbarItem - Static variable in class ij.Menus
 
ToolBox - Class in ij.gui
 
ToolBox() - Constructor for class ij.gui.ToolBox
 
toolboxButton - Static variable in class ij2x.plugin.CollapsiblePane
 
Tools - Class in ij.util
This class contains static utility methods.
Tools() - Constructor for class ij.util.Tools
 
TOOLS_MENU - Static variable in class ij.Menus
 
TOP - Static variable in class ij.io.RoiDecoder
 
TOP - Static variable in class ij.plugin.frame.jedit.JEditTextArea
 
TOP_MARGIN - Static variable in class ij.gui.Plot
the margin width above the plot frame
toString() - Method in class gnu.regexp.RE
Return a human readable form of the compiled regular expression, useful for debugging.
toString() - Method in class gnu.regexp.REMatch
Returns the string matching the pattern.
toString(int) - Method in class gnu.regexp.REMatch
Returns the string matching the given subexpression.
toString() - Method in class ij.gui.ImageWindow
 
toString() - Method in class ij.gui.Overlay
 
toString() - Method in class ij.gui.PointRoi
 
toString() - Method in class ij.gui.Roi
 
toString() - Method in class ij.ImagePlus
 
toString() - Method in class ij.ImageStack
 
toString() - Method in class ij.io.FileInfo
 
toString() - Method in class ij.macro.Symbol
 
toString() - Method in class ij.measure.Calibration
 
toString() - Method in class ij.measure.ResultsTable
 
toString() - Method in class ij.plugin.frame.jedit.EBMessage
Returns a string representation of this message.
toString() - Method in class ij.plugin.frame.jedit.Mode
Returns a string representation of this edit mode.
toString() - Method in class ij.plugin.frame.jedit.syntax.ParserRuleSet
 
toString() - Method in class ij.plugin.frame.jedit.syntax.Token
Returns a string representation of this token.
toString() - Method in class ij.plugin.frame.jedit.SyntaxStyle
Returns a string representation of this object.
toString() - Method in class ij.plugin.frame.jedit.tokenmarker.Token
Returns a string representation of this token.
toString() - Method in class ij.process.FHT
Returns a string containing information about this FHT.
toString() - Method in class ij.process.ImageProcessor
Returns a string containing information about this ImageProcessor.
toString() - Method in class ij.process.ImageStatistics
 
toWatershed(ImageProcessor) - Method in class ij.plugin.filter.EDM
Do watershed segmentation based on the EDM of the foreground objects (nonzero pixels) in an 8-bit image.
TRACE - Static variable in class ij.macro.Interpreter
 
TRACED_ROI - Static variable in class ij.gui.Roi
 
transform() - Method in class ij.process.FHT
Performs a foreward transform, converting this image into the frequency domain.
TRANSFORM - Static variable in class ij.Undo
 
Transformer - Class in ij.plugin.filter
Implements the Flip and Rotate commands in the Image/Transform submenu.
Transformer() - Constructor for class ij.plugin.filter.Transformer
 
translate(int, int) - Method in class ij.gui.Overlay
Moves all the Rois in this overlay.
translate(double, double) - Method in class ij.process.ImageProcessor
Moves the image or selection vertically or horizontally by a specified number of pixels.
translate(int, int, boolean) - Method in class ij.process.ImageProcessor
Deprecated. replaced by translate(x,y)
Translator - Class in ij.plugin.filter
This plugin implements the Image/Translate command.
Translator() - Constructor for class ij.plugin.filter.Translator
 
TRANSPARENT - Static variable in class ij.CompositeImage
 
TRIANGLE - Static variable in class ij.gui.Plot
Display points using an tiangular mark.
TRIANGLE - Static variable in class ij.gui.PlotWindow
Display points using an tiangular mark.
trim() - Method in class ij.ImageStack
Frees memory by deleting a few slices from the end of the stack.
trim() - Method in class ij.VirtualStack
Does nothing.
trimFileList(String[]) - Method in class ij.plugin.FolderOpener
Removes names that start with "." or end with ".db". ".txt", ".lut", "roi", ".pty" or ".hdr", ".py", etc.
trimKey(String) - Static method in class ij.Macro
 
TrimmedButton - Class in ij.gui
This is an extended Button class used to reduce the width of the HUGE buttons on Mac OS X.
TrimmedButton(String, int) - Constructor for class ij.gui.TrimmedButton
 
trimProcessor() - Method in class ij.ImagePlus
Frees RAM by setting the snapshot (undo) buffer in the current ImageProcessor to null.
TRUE - Static variable in interface ij.macro.MacroConstants
 
tSelector - Variable in class ij.gui.StackWindow
 
TSQLTokenMarker - Class in ij.plugin.frame.jedit.tokenmarker
Transact-SQL token marker.
TSQLTokenMarker() - Constructor for class ij.plugin.frame.jedit.tokenmarker.TSQLTokenMarker
 
type - Variable in class ij.gui.Roi
 
TYPE - Static variable in class ij.io.RoiDecoder
 
type - Variable in class ij.macro.Symbol
 
TYPE_CONVERSION - Static variable in class ij.Undo
 
TypeConverter - Class in ij.process
This class converts an ImageProcessor to another data type.
TypeConverter(ImageProcessor, boolean) - Constructor for class ij.process.TypeConverter
 
types - Static variable in class ij.io.Opener
 

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